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Coronavirus COVID-19 Updates: uc.edu/publichealth
Mission: To provide a mechanism for sharing data and biospecimen from a large longitudinal cohort as a resource to researchers for approved studies.
Description: The Fernald Community Cohort consists of the 9782 persons who were enrolled in the Fernald Medical Monitoring Program (FMMP)(1990-2008). The comprehensive examinations conducted as part of the Fernald Medical Monitoring Program (FMMP) began in the autumn of 1990. The FMMP provided 9,782 initial examinations and 42,775 re-examinations over 18 years. An extensive computerized database and biospecimen repository was created to provide research resources for future studies. All questionnaire, examination and diagnostic procedure data collected from the FMMP were coded by certified medical record coders, double entered with verification into a SAS database on site of the examinations. Cryo-preserved blood and urine samples were collected at enrollment and at various intervals throughout follow-up. At the first examination three 1-ml aliquots of whole blood, plasma, serum, urine and urine with buffer were obtained from each participant (15 aliquots per person) for future analyses. Additional whole blood and serum was obtained in 1996-1997 and 2006-2008. Specimens have been stored in minus 80 degree freezers; over 160,000 biospecimens are in the archive. More information about the cohort and the “Access to Data and Biospecimen Policy” and application form can be found at www.eh.uc.edu/fmmp/research.
Service | Cost |
---|---|
Data Preparation (per project) |
$1,395.00 |
Biospecimens (per Sample/Specimen) |
$8.00 |
Medical Records (per Record) |
$73.25 |
Research Consultations - Research Director (per Hour) |
$112.25 |
Research Consultations- Data Analyst (per Hour) |
$95.00 |
Research Consultations- Research Coordinator (per Hour) |
$50.00 |
Research Consultations - Clinical Research Assistant (per Hour) |
$30.00 |
Aliquot (per Sample) |
$6.50 |
Pass through- Supplies/ Postage (Pass through cost) |
N/A |
Fernald Database and Biospecimens Service Center Services |
N/A |
A list of projects that have used Fernald Community Cohort Data and Biospecimens
Copeland
Pesce
Anderson
Pinney
Pinney
Pinney
Pinney
Pinney
Pinney
Deets
Horn
Wones
Cho
Fennel
Pinney
Gerhardstein
Bissler
Bissler
Brown
Allard
Mahoney
Pinney
Wones
Anderson
Barrett
Nebert
Ho
Zucker
Pinney
Chakraborty
Schauer
Chung
Pinney
Pesce
Blomkalns
Pinney
Chen
Pesce
Pinney
Wu
Succop
Dietrich
Pinney
Habli
Pinney
Burch
Freedman
Stambrook
Meinhold
Ward
Pinney
Chakraborty
Walker
Lu
Martin
Wones
Pisano
Wehnes
Ben-Jonathan
Harley
Smith
Lu
Weber
Smith
Huth
Woollett
Pinney
Martin
Choi
Lockey
Yaghjan
Burns
Chen
Fenton
Owens
Wang
Bessonneau
Pinney
Ho
Pinney
Last Name
Pinney
~~As of September 30, 2016, we have 159,645 banked biospecimens in six -80 C freezers.
Number of 1.0 ml aliquots (in 1.5 ml polypropylene cyrovial) banked per person at different times and total number of aliquots.
Examination/Year Blood Serum Plasma Urine (unbuffered) Urine (buffered)
Initial exam (mostly 1991-1994) 15 15 15 15 15
Second exam 2 2
2006 (just those with cancer diagnoses) 3
2007-2008 exam (urine only on a portion of the cohort) 3 3 3 3
Total aliquots remaining in freezer1 (not distributed) 32,990 48,139 36,179 21,017 20,940
1 An additional 380 DNA aliquots are banked in the freezers
Aliquots are stored in six -80 C freezers, with polypropylene boxes stored within metal racks, which improves temperature stability when the freezer is opened.
1. Copeland BE, Pesce AJ. The Medical Heritage Concept: A Model for Assuring Comparable Laboratory Results in Long-Term Longitudinal Studies. Ann Clin Lab Sci 1992; 22(2):110-124. PMID: 1562165 https://www.ncbi.nlm.nih.gov/pubmed/1562165
2. Wones R, Radack K, Martin V, Mandell K, Pinney S, Buncher R. Do persons living near a uranium processing site have cytogenetic damage? Mutation Research 1995; 335:171-184. PMID: 7477048. http://www.sciencedirect.com/science/article/pii/0165116195900535
3. Radack KL, Pinney SM, Livingston GK. Sources of variability in the human lymphocyte micronucleus assay: A population-based study, Environmental and Molecular Mutagenesis 1995; 26:26-36. PMID: 7641705 https://www.ncbi.nlm.nih.gov/pubmed/7641705
4. Radack K, Martin V, Wones R, Buncher R, Pinney S, Mandell K. Intercorrelations and sources of variability in three mutagenicity assays of somatic mutations: A population-based study. Mutation Research 1996; 350:295-306. PMID: 8600359 http://www.sciencedirect.com/science/article/pii/002751079500162X
5. De BK, Karr BA, Ghosn S, Copeland BE. Problems and Practical Considerations in Assessing Accuracy with NIST SRM 909a; Report of Defective Vials. Clinical Chemistry 1996; 42(11):1832-1837. PMID:8906084 http://clinchem.aaccjnls.org/content/42/11/1832.long
6. Woo JG, Pinney SM. Retrospective Smoking History Data Collection for Deceased Workers: Completeness and Accuracy of Surrogate Reports. JOEM 2002; 44(10):915-923. PMID: 12921382 http://journals.lww.com/joem/pages/articleviewer.aspx?year=2002&issue=10000&article=00010&type=abstract
7. Pinney SM, Freyberg RW, Levine GH, Brannen DE, Mark LS, Nasuta JM, Tebbe CD, Buckholz JM, Wones R. Health Effects in Community Residents Near a Uranium Plant at Fernald, Ohio, USA. International Journal of Occupational Medicine and Environmental Health 2003; 16(2):139-153. PMID: 12921382 https://www.ncbi.nlm.nih.gov/pubmed/?term=Health+Effects+in+Community+Residents+Near+a+Uranium+Plant+at+Fernald%2C+Ohio%2C+USA
8. Bailey-Wilson JE*, Amos CI, Pinney SM, Petersen GM, de Andrade M, Wiest JS, Fain P, Schwartz AG, You M, Franklin W, Klein C, Gazdar A, Rothschild H, Mandal D, Coons T, Slusser J, Lee J, Gaba C, Kupert E, Perez A, Zhou X, Zeng D, Liu Q, Zhang Q, Seminara D, Minna J, Anderson M. A major lung cancer susceptibility locus maps to chromosome 6q23-25. American Journal of Human Genetics 2004; 75:460-474. Epub 2004 Jul 21.PMID: 15272417 http://www.sciencedirect.com/science/article/pii/S0002929707633175
9. Gerhardstein BG, Brown P. The Benefits of Community Medical Monitoring at Nuclear Weapons Production Sites: Lessons From Fernald. Environmental Law Review News & Analysis 2005; 35:10531-10538. No PMID http://eh.uc.edu/assets/uploads/2015/02/35.10530.pdf
10. Brown MK, Verkamp S, Yocum E, Schrorr C. Fernald Area Cisterns and Wells: What is Known and What Do We Need To Know? The findings of the MTA project are provided in their entirety on CD (publication 2006), in bound Manual (publication 2008) and at the following websites: www.fernalkdfchec.com, www.mtafund.org. http://fernaldfchec.com/Project.html
11. Wang M, Vikis HG, Wang Y, Jia D, Wang D, Bierut LJ, Bailey-Wilson JE, Amos CI, Pinney SM, Petersen GM, de Andrade M, Yang P, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Jinna J, Gaba C, Rothchild H, Mandal D, Kupert E, Seminara D, Liu Y, Viswanathan A, Govindan R, Anderson W, You M. Identification of a Novel Tumor Suppressor Gene p34 on Human Chromosome 6q25.1. Cancer Research 2007; 67(1): 93-99. PMID: 17210687 http://cancerres.aacrjournals.org/content/67/1/93.long
12. Vikis H, Sato M, James M, Wang D, Wang Y, Wang M, Jia D, Liu Y, Bailey-Wilson JE, Amos CI, Pinney SM, Petersen GM, de Andrade M, Yang P, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Gaba C, Rothschild H, Mandal D, Kupert E, Seminara D, Viswanathan A, Govindan R, Minna J, Anderson MW, You M. EGFR-T790M is a rare lung cancer susceptibility allele with enhanced kinase activity. Cancer Research 2007; 67(10): 4665-70. PMID: 17510392 http://cancerres.aacrjournals.org/content/67/10/4665.long
13. Hornung RW, Pinney SM, Lodwick J, Killough G, Brewer DE, Nasuta J. Estimation of Radon Exposures to Workers at the Fernald Feed Materials Production Center, 1952-1988. Journal of Exposure Science and Environmental Epidemiology 2008; 18(5):512-523. Epub 2008 Jan 9. PMID: 18183043 http://www.nature.com/jes/journal/v18/n5/full/7500645a.html
14. Liu P, Vikis HG Wang D, Lu Y, Wang Y, Schwartz AG, Pinney SM, Yang P, de Andrade M, Peterson GM, Weist JS, Fain PR, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee, J, Kupert E, Seminara D, Minna J, Bailey- Wilson JE, Wu X, Spitz MR, Eisen T, Houlston RS, Amos CI, Anderson MW, You M. Familial Aggregation of Common Sequence Variants on 15q24-25.1 in Lung Cancer. Journal of the National Cancer Institute 2008; 100(18):1326-1330. PMID: 18780872 http://jnci.oxfordjournals.org/content/100/18/1326.long
15. You M*, Wang D*, Liu P*, Vikis H*, James M*, Lu Y, Wang Y, Wang M, Jia D, Liu Y, Yang P, Zheng W, Shu XO, Long J, Gao YT, Xiang YB, Chow WH, Pinney SM, Petersen GM, de Andrade M, Wiest JS, Fain PR, Schwartz AG, Gazdar A, Gaba C, Rothschild H, Mandal D, Coons T, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Amos CI, Anderson MW . Fine mapping of chromosome 6q23-25 region in familial lung cancer families reveals RGS17 as a likely candidate gene. Clinical Cancer Research 2009; 15(8); 2666-73. Epub 2009 Apr 7. PMID: 19351763 http://clincancerres.aacrjournals.org/content/15/8/2666.long
16. Christiani DC. Lung Cancer Genetics: A Family Affair. Clin Cancer Res 2009; 15(8):2581-2582. PMID: 19351746 http://clincancerres.aacrjournals.org/content/15/8/2581.long
17. Wones R, Pinney SM, Buckholz JM, Deck-Tebbe C, Freyberg R, Pesce A. Medical Monitoring: A Beneficial Remedy for Residents Living Near an Environmental Hazard Site. J Occup Environ Med. 2009; 51:1374–1383. PMID: 19952785 doi: 10.1097/JOM.0b013e3181c558f1 http://journals.lww.com/joem/pages/articleviewer.aspx?year=2009&issue=12000&article=00007&type=abstract
18. Liu Y, Liu P, Wen W, James MA, Wnag Y, Bailey-Wilson JE, Amos CI, PInney SM, Yang P, de Andrade M, Peterson GM, Wiest JS, Pain PR, Schwartz AG, Gazdar A, Gaba C, Pothschild H, Mandal D, Kupert E, Lee J, Seminara D, Minna J, Anderson MW, You M. Haplotype cell proliferation analyses of candidate lung cancer susceptibility genes on chromosomes 15q24-25.1. Cancer Research 2009; 69(19): 7844-7850. PMID: 1978933 http://cancerres.aacrjournals.org/content/69/19/7844.long
19. Amos CI, Pinney SM, Li Y, Kupert E, Lee J, de Andrade MA, Yang P, Schwartz AG, Fain PR, Gazdar A, Minna J, Wiest J, Zeng D, Rothschild H, Mandal D, You M, Coons T, Gaba C, Bailey-Wilson JE, Anderson MW. A susceptibility locus on chromosome 6q greatly increases risk lung cancer risk among light and never smokers. Cancer Research 2010; 70(6):2359-2367. Epub 2010 Mar 9. PMID: 20215501 http://cancerres.aacrjournals.org/content/70/6/2359.long
20. Liu P, Yang P, Wu X, Vikis HG, Lu Y, Wang Y, Schwartz AG, Pinney SM, de Andrade M, Gazdar A, Gaba C, Mandal D, Lee J, Kupert E, Seminara D, Minna J, Bailey-Wilson JE, Spitz M, Amos CI, Anderson MW, You M. A Second Genetic Variant on Chromosome 15q24-25.1 Associates with Lung Cancer. Cancer Research 2010; 70(8): 3128-35. PMID: 20395203 http://cancerres.aacrjournals.org/content/70/8/3128.long
21. Fang S, Pinney SM, Bailey-Wilson J, de Andrade M, Li Yafang, Kupert E, You M, Schwartz A, Yang P, Anderson M, Amos CI. Ordered subset analysis identifies loci influencing lung cancer risk on chromosomes 6q and 12q. Cancer Epidemiol Biomarkers Prev 2010; 19(12):3157-66. Epub 2010 Oct 28. PMID: 21030603 http://cebp.aacrjournals.org/content/19/12/3157.long
22. Wagner SE, Burch JB, Bottai M, Puett R, Porter D, Pinney SM, Vena JE, J.R. Hypertension and hematologic parameters in a community near a uranium processing facility. Environmental Research 2010; 110(8):786-797. PMID: 20889151 http://www.sciencedirect.com/science/article/pii/S0013935110001465
23. Yaghjyan L, Pinney SM, Mahoney MC, Morton AR, Buckholz J, Samaratunga R. Mammographic Breast Density Assessment: A Methods Study. Atlas Journal of Medical & Biological Sciences 2011; 1(1): 8-14. No PMID http://www.atlas-publishing.org/wp-content/uploads/2013/07/2-AJMBS-Yaghiyan_et_al_2011.pdf
24. Kupert E, Anderson M, Liu Y, Succop P, Levin L, Wang J, Wikenheiser-brokamp K, Chen P, Pinney SM, Macdonald T, Dong Z, Starnes S, Lu S. Plasma secretory phospholipase A2-lll as a potential biomarker for lung cancer in patients with solitary pulmonary nodules. BCM Cancer 2011; 11:513. PMID: 22151235 https://bmccancer.biomedcentral.com/articles/10.1186/1471-2407-11-513
25. Yaghjyan L, Mahoney MC, Succop P, Wones R, Buckholz J, Pinney SM. Relationship between breast cancer risk factors and mammographic breast density in Fernald Community Cohort. British Journal of Cancer 2012; 106(5): 996-1003. Epub 2012 Jan 26. PMID: 22281662 http://www.nature.com/bjc/journal/v106/n5/full/bjc20121a.html
26. Blomkalns AL, Gavrila D, Thomas M, Nelter BS, Blanco VM, Benjamin SB, McCormick ML, Stoll LL, Denning GM, Collins SP, Qin Z, Daugherty A, Cassis LA, Thompson RW, Weiss RM, Linkower PD, Pinney SM, Chatterjee T, Weintraub NL. CD14 directs adventitial macrophage precursor recruitment: role in early abdominal aortic aneurysm formation. J Am Heart Assoc 2013; 8(2):2. PMID: 23537804 http://jaha.ahajournals.org/content/2/2/e000065.long
27. Lu PY, Kottyan LC, James JA, Xie C, Buckholz JM, Pinney SM, Harley JB. Systemic Lupus Erythematosus is Associated with Uranium Exposure in a Community Living Near a Uranium Processing Plant: A Nested Case-Control Study. Arthritis and Rheumatology 2014; 66(11):3105-3112. PMID: 25103365 http://onlinelibrary.wiley.com/doi/10.1002/art.38786/abstract;jsessionid=ADA04BD338DC7990D56CBD8DB52A513C.f04t04
28. Xiong D, Wang Y, Kupert E, Simpson C, Pinney SM, Gaba CR, Mandal D, Schwartz AG, Yang P, de Andrade M, Pikielny C, Byun J, Li Y, Stambolian D, Spitz MR, Amos CI, Bailey-Wilson JE, Anderson MW, You M. A recurrent mutation in PARK2 in familial lung cancer. Am J Hum Genet 2015; 96(2):301-308. Epub 2015 Jan 29. PMID:25640678 http://www.sciencedirect.com/science/article/pii/S0002929714005229
29. Yang S, Pinney SM, Mallick P, Ho SM, Bracken B, Wu T. Impact of Oxidative Stress Biomarkers and Carboxymethyllysine (an Advanced Glycation End Product) on Prostate Cancer: A Prospective Study. Clin Genitourin Cancer. 2015 Apr 18. pii: S1558-7673(15)00076-2. doi: 10.1016/j.clgc.2015.04.004. [Epub ahead of print]. PMID:25972296. http://www.sciencedirect.com/science/article/pii/S1558767315000762
30. Xie, C., Ghulam, E., Chen, A., Wang, K., Pinney, S., & Lindsell, C. (2015). Weighted Multiple Testing Correction for Correlated Endpoints in Survival Data. In D. Chen, J. Wilson (Eds), Innovative Statistical Methods for Public Health Data (pp315-323) Switzerland: Springer International Publishing. http://link.springer.com/chapter/10.1007/978-3-319-18536-1_14/fulltext.html
31. Pinney SM, Biro FM. Letter to the editor re Morollo-Frosh “Communicating Results in Post-Belmont Era Biomonitoring Studies”. Environ Res. 2015; June 12. [Epub ahead of print]. 26076818. http://www.sciencedirect.com/science/article/pii/S001393511500170X
32. Liu Y, Kheradmand F, Davi CF1, Scheurer ME, Wheeler D, Tsavachidis S, Armstrong G, Simpson C, Mandal D, Kupert E, Anderson M, You M, Xiong D, Pikielny C, Schwartz AG, Bailey-Wilson JE, Gaba C, De Andrade M, Yang P, Pinney SM, The Genetic Epidemiology of Lung Cancer Consortium, Amos CI, Spitz MR. Focused Analysis of Exome Sequencing Data for Rare Mutations in Familial and Sporadic Lung Cancer. In press, Journal of Thoracic Oncology. 2016 Jan;11(1):52-61. doi: 10.1016/j.jtho.2015.09.015. http://www.sciencedirect.com/science/article/pii/S1556086415000246
33. Jorge-Nebert LF, Zhang G, Wilson KM, Jiang Z, Butler R, Gluckman JL, Pinney SM, Nebert DW. Head-and-neck squamous cell carcinoma risk in smokers: no association detected between phenotype and AHR, CYP1A1, CYP1A2, or CYP1B1 genotype. Hum Genomics 2016; 10(1): 39. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127090/
34. Martin AT, Pinney SM, Xie C, Herrick RL, Bai Y, Buckholz J, Martin VT. Headache Disorders are a Risk Factor for the Development of New Onset Hypothyroidism. Headache 2017; 57:21-30. doi: 10.1111/head.12943. Epub 2016 Sep 27. PMID: 27676320. http://onlinelibrary.wiley.com/doi/10.1111/head.12943/abstract
35. Herrick RL, Buckholz JM, Biro FM, Calafat AM, Ye X, Xie C, Pinney SM. Polyfluoroalkyl substance exposure in the Mid-Ohio River Valley, 1991-2012. Environmental Pollution 2017; 228: 50-60. http://www.sciencedirect.com/science/article/pii/S0269749117301264
36. Giannini CM, Herrick RL, Buckholz JM, Daniels AR, Biro FM, Pinney SM. Comprehension and Perceptions of Study Participants Upon Receiving Perfluoroalkyl Substance Exposure Biomarker Results. Submitted to the International Journal of Hygiene and Environmental Health, March 12th, 2018.
Cincinnati
CARE/Crawley Building
Suite E-870
3230 Eden Avenue
PO Box 670555
Cincinnati, OH 45267-0555
Mail Location: 0555
Phone: 513-558-7333
Fax: 513-558-3512
Email: College of Medicine